Curriculum VitaeLast updated: March 7, 2022
Joint Genome Institute, Lawrence Berkeley National Lab 1 Cyclotron Rd, Berkeley, CA 94720 [email protected] Education Fordham University, Bronx, NY PhD, Department of Biological Sciences, 2015-2020 Advisor: JD Lewis, Department of Biological Sciences New York University, New York, NY BA, Department of Environmental Studies, 2011-2015 Advisors: Katie Schneider-Paolantonio & Mary Killilea, Department of Biology Publications † Indicates undergraduate mentee Barnes EM, Tringe SG (2022). Exploring the roles of microbes in facilitating plant adaptation to climate change. Biochemical Journal. 479(3): 327-335. Doi: 10.1042/BCJ20210793 Chiniquy D, Barnes EM,...,Tringe SG (2021). Microbial community field surveys reveal abundant Pseudomonas population in sorghum rhizosphere composed of many closely related phylotypes. Frontiers in Microbiology. 12:598180. Doi: 10.3389/fmicb.2021.598180 Barnes EM, Kutos S, Naghshineh N, Mesko M, You Q, Lewis JD (2021). Assembly of the amphibian microbiome is influenced by the effects of land-use change on environmental reservoirs. Environmental Microbiology. 23(8). Doi: 10.1111/1462-2920.15653 Barnes EM, Carter EL†, Lewis JD (2020). Predicting microbiome function across space is confounded by strain-level differences and functional redundancy. Frontiers in Microbiology. 11:101. Doi: 10.3389/fmicb.2020.00101 Barnes EM, Lewis JD (Submitted). Priority effects in the amphibian microbiome create alternative states of disease susceptibility. Preprint Doi: 10.1101/2021.07.20.453099 Parkins KL, Elbin SB, Barnes E (2015) Light, Glass, and Bird-building Collisions in an Urban Park. Northeastern Naturalist. 22(1): 84-94. Doi: 10.1656/045.022.0113 Presentations Barnes EM (2022) Historical contingency in host-associated microbiomes: untangling susceptibility to pathogens and stress. Talk presented at Ecological Society of Japan, virtual invited symposium, " Contingency & Determinism: How did biogeographic processes interplay with macroevolution?" Barnes EM, Chiniquy D, Hartman K, Tringe SG (2021) I'll be there for you: Microbe-mediated resilience to abiotic stress in Sorghum bicolor. Talk presented at Ecological Society of America, virtual. Barnes EM, (2020) Okay microbes, now let's get in formation: Assembly of bacteria from soil to amphibian skin. Talk presented at Ecological Society of America, virtual. Barnes EM, Kurzum S, Lewis JD (2019) Priority effects in the amphibian microbiome alter defense against Batrachochytrium dendrobatidis. Talk presented at Ecological Society of America, Louisville, KY. Jang Y, Barnes EM, Cappuccilli B (2019) Citizen Science: Reconnecting People to the Natural World. Ewha-Luce International Seminar Special Lecture: Science & Society Panel, Seoul, South Korea. Barnes EM, Carter E, Naghshineh N, Lewis JD (2018) Cutaneous bacterial communities of Plethodon cinereus along an urban-to-rural gradient. Talk presented at Ecological Society of America, New Orleans, LA. Barnes EM, Lewis JD (2017) The Role of Microbial Community Assembly Dynamics on the Defense Mechanisms of Plethodon cinereus. Poster presented at Ecological Society of America, Portland, OR. Carlen EJ, Barnes EM (2017) Bringing Food Trucks into the Classroom: A Lesson on Community Assembly. Poster presented at Evolution, Portland, OR. Barnes EM (2017) The Role of Urbanization & Community Assembly on the Microbial Defense Mechanisms of Plethodon cinereus. Poster presented at Evolution, Portland, OR. Barnes EM (2015) Birds of Urban Green Spaces: The relationship between tree species richness and avian biodiversity. Presented at: New York University Undergraduate Research Conference, New York, NY. Abstract published in: Inquiry: A journal of undergraduate research. volume 19. New York University. Parkins KL, Elbin SB, Palmer A, Klein D, Barnes EM (2013) Project Safe Flight: Making New York Safe for Migratory Birds. New York City Audubon. Poster presented at New York State Ornithological Association 66th Annual Meeting / New York Birders Conference, Uniondale, NY. Barnes EM (2013) Water Quality and Biodiversity in Jamaica Bay After Hurricane Sandy. Presented at: Greater New York/New Jersey Harbor Herons and Waterbirds Working Group Annual Meeting, Staten Island, NY. Fellowships & Grants 2019-2020 Freedman Fellow for Women in Science 2019 Ewha-Luce International Seminar Fellow 2017-2019 Clare Boothe Luce Fellow for Women in Science 2018 Fordham Student Support Research & Travel Grant 2017 Louis Calder Center Research Grant 2013-2015 Women in Science Scholar 2013 NYU Dean's Undergraduate Research Grant 2013 Z.M. Global Travel Grant Awards 2019 Three Minute Thesis, People's Choice Winner 2016 National Science Foundation GRFP, Honorable Mention 2015 Environmental Studies Senior Award 2015 Best In Urbanization & Science Panel, NYU 2015 Phi Beta Kappa, Beta Chapter of New York 2014 Joseph Gilbride Research Scholar 2013 New York University Leadership Honors Scholar Professional Experience 2018 Research Collaborator Prospect Park Alliance, NYC Dept. of Parks & Recreation, NYS Dept. Environmental Conservation Discovery/mapping wildlife disease in a major wildlife trade stopover city 2017-2020 Instructor & Course Developer New York Botanical Garden Science courses designed for non-scientists, practitioners, & novices Courses: Forest Ecology, Plant Diversity, Intro to Plant Science, Basic Plant ID, Amphibians, The Science of Tree Communication, Basic Botany: Training for the Department of Environmental Protection 2015-2017 Teaching Assistant: Ecology Lab Fordham University 2017-2019 Ecological Field Methods Guest Lecturer New York University 2013-2015 Conservation Research Assistant NYC Audubon 2014 Welikia Project Wildlife Conservation Society 2013 Summer Science Educator Theodore Roosevelt Sanctuary and Audubon Center |
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